Epidemiology and control of SARS-CoV-2 epidemics in partially vaccinated populations
Bosetti P, Tran Kiem C, Andronico A, Colizza V, Yazdanpanah Y, Fontanet A, Benamouzig D, Cauchemez S Background: Vaccination is expected...
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Jan 22, 2022
Towards Human in the Loop Analysis of Complex Point Clouds
Full title: Towards Human in the Loop Analysis of Complex Point Clouds: Advanced Visualizations, Quantifications, and Communication...
Jan 7, 2022
Sensitive visualization of SARS-CoV-2 RNA with CoronaFISH
Life Science Alliance Rensen E, Pietropaoli S, Mueller F, Weber C, Souquere S, Sommer S, Isnard P, Rabant M, Gibier JB, Terzi F,...
Jan 6, 2022
Impact of booster vaccination on the control of COVID-19 D wave in the context of waning immunity
Full title: Impact of booster vaccination on the control of COVID-19 Delta wave in the context of waning immunity: application to France...
Dec 1, 2021
Viral evolution sustains a dengue outbreak of enhanced severity
Emerg Microbes Infect Inizan C, Minier M, Prot M, O'Connor O, Forfait C, Laumond S, Marois I, Biron A, Gourinat AC, Goujart MA, Descloux...
Nov 26, 2021
Impact of SARS-CoV-2 Delta variant on incubation, transmission settings and vaccine effectiveness: R
The Lancet Regional Health - Europe Grant R, Charmet T, Schaeffer L, Galmiche S, Madec Y, Von Platen C, Chény O, Omar F, David C, Rogoff...
Nov 25, 2021
A modelling study investigating short and medium-term challenges for COVID-19 vaccination
Full title: A modelling study investigating short and medium-term challenges for COVID-19 vaccination: From prioritisation to the...
Nov 25, 2021
SARS-CoV-2 transmission across age groups in France and implications for control
Nature Communications Tran Kiem C, Bosetti P, Paireau J, Crépey P, Salje H, Lefrancq N, Fontanet A, Benamouzig D, Boëlle PY, Desenclos...
Nov 18, 2021
Model-based assessment of Chikungunya and O’nyong-nyong virus circulation
Nature communications Hozé N, Diarra I, Sangaré AK, Pastorino B, Pezzi L, Kouriba B, Sagara I, Dabo A, Djimdé A, Thera MA, Doumbo OK, de...
Nov 2, 2021
A Minimal yet Flexible Likelihood Framework to Assess Correlated Evolution
Systematic Biology Behdenna A, Godfroid M, Petot P, Pothier J, Lambert A, Achaz G An evolutionary process is reflected in the sequence...
Sep 30, 2021
LMT USV Toolbox, a Novel Methodological Approach to Place Mouse Ultrasonic Vocalizations in Their Be
Frontiers in Behavioral Neuroscience De Chaumant F, Lemière N, Coqueran S, Bourgeron T, Ey E Ultrasonic vocalizations (USVs) are used as...
Sep 19, 2021
Conformational Insights into the Control of CNF1 Toxin Activity by Peptidyl- Prolyl Isomerization
Full title: Conformational Insights into the Control of CNF1 Toxin Activity by Peptidyl- Prolyl Isomerization: A Molecular Dynamics...
Sep 14, 2021
Assessing the feasibility of Nipah vaccine efficacy trials based on previous outbreaks in Bangladesh
Vaccine Birgit Nikolay, Gabriel Ribeiro dos Santos, Marc Lipsitch, Mahmudur Rahman, Stephen P. Luby, Henrik Salje, Emily S. Gurley, Simon...
Aug 29, 2021
Multitrait GWAS to connect disease variants and biological mechanisms
PLoS Genet Julienne H, Laville V, McCaw ZR, He Z, Guillemot V, Lasry C, Ziyatdinov A, Nerin C, Vaysse A, Lechat P, Ménager H, Le Goff W,...
Aug 16, 2021
A Structural and Dynamic Analysis of the Partially Disordered Polymerase-Binding Domain in RSV Phosp
Biomolecules A Structural and Dynamic Analysis of the Partially Disordered Polymerase-Binding Domain in RSV Phosphoprotein Cardone C,...
Aug 9, 2021
Biogeographic drivers of community assembly on oceanic islands: the importance of archipelago struct
Journal of Biogeography Aguilée R, Pellerin F, Soubeyrand M, Choin J and Thébaud C Aim: Accounting for geo-environmental dynamics is...
Jul 22, 2021
Strainberry: automated strain separation in low-complexity metagenomes using long reads
Nat Commun Vicedomini R, Quince C, Darling AE, Chikhi R High-throughput short-read metagenomics has enabled large-scale species-level...
Jul 14, 2021
Quicksom: Self-Organizing Maps on GPUs for clustering of molecular dynamics trajectories
Published in Bioinformatics Mallet V, Nilges M, Bouvier G Summary: We implemented the Self-Organizing Maps algorithm running efficiently...
Jul 12, 2021
Impact of original, B.1.1.7, and B.1.351/P.1 SARS-CoV-2 lineages on vaccine effectiveness of two dos
The Lancet Regional Health – Europe Charmet T, Schaeffer L, Grant G, Galmiche S, Chény O, Von Platen C, Maurizot A, Rogoff A, Omar F,...
Jul 1, 2021
Spatial Distribution and Burden of Emerging Arboviruses in French Guiana
Viruses Bailly S, Rousset D, Fritzell C, Hozé N, Ben Achour S, Berthelot L, Enfissi A, Vanhomwegen J, Salje H, Fernandes-Pellerin S,...
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