Genomic Evidence for Local Adaptation of Hunter-Gatherers to the African Rainforest
Current Biology Marie Lopez, Jeremy Choin, Martin Sikora, Paul Verdu, Etienne Patin, Lluís Quintana-Murci. African rainforests support...
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PastView: a user-friendly interface to explore ancestral scenarios
BMC Evolutionary Biology François Chevenet, Guillaume Castel, Emmanuelle Jousselin, and Olivier Gascuel. BACKGROUND: Ancestral character...
Diversification of the type IV filament superfamily into machines for adhesion, protein secretion
Plos Biology Rémi Denise, Sophie S. Abby, Eduardo P. C. Rocha Processes of molecular innovation require tinkering and shifting in the...
Assessing Zika Virus Transmission Within Households During an Outbreak in Martinique, 2015-2016
American Journal of Epidemiology Anthony Cousien, Sylvie Abel, Alice Monthieux, Alessio Andronico, Isabelle Calmont, Minerva Cervantes,...
A Fast Likelihood Method to Reconstruct and Visualize Ancestral Scenarios
Mol Biol Evol. Ishikawa SA, Zhukova A, Iwasaki W, Gascuel O. The reconstruction of ancestral scenarios is widely used to study the...
Comparative Analysis of eleven Healthcare-Associated outbreaks of Middle east Respiratory syndrome
Scientific Reports Sibylle Bernard-stoecklin, Birgit Nikolay, Abdullah Assiri, Abdul Aziz Bin saeed, peter Karim Ben embarek, Hassan el...
Transmission of Nipah Virus - 14 Years of Investigations in Bangladesh
The New England Journal of Medicine Birgit Nikolay, Dr.rer.nat., Henrik Salje, Ph.D., M. Jahangir Hossain, M.B., B.S., A.K.M. Dawlat...
Distribution and asymptotic behavior of the phylogenetic transfer distance
Journal of Mathematical Biology Dávila Felipe M, Domelevo Entfellner JB, Lemoine F, Truszkowski J, Gascuel O. The transfer distance (TD)...
NGPhylogeny.fr: new generation phylogenetic services for non-specialists
Nucleic Acids Research Frédéric Lemoine, Damien Correia, Vincent Lefort, Olivia Doppelt-Azeroual, Fabien Mareuil, Sarah Cohen-Boulakia,...
Spatio-temporal dynamics of dengue in Brazil: Seasonal travelling waves
PLoS Neglected Tropical Diseases Churakov M, Villabona-Arenas CJ, Kraemer MUG, Salje H, Cauchemez S. Dengue continues to be the most...
Epidemiological characteristics of an urban plague epidemic in Madagascar, August-November, 2017
The Lancet. Infectious Diseases Rindra Randremanana, PhD,a,* Voahangy Andrianaivoarimanana, PhD,b,* Birgit Nikolay, PhD,d,* Beza...
Graph analysis of fragmented long-read bacterial genome assemblies
Bioinformatics Marijon P, Chikhi R, Varré JS. Abstract MOTIVATION: Long-read genome assembly tools are expected to reconstruct bacterial...
Incorporating alignment uncertainty into Felsenstein’s phylogenetic bootstrap
Bioinformatics Chang JM, Floden EW, Herrero J, Gascuel O, Di Tommaso P, Notredame C Motivation Most evolutionary analyses are based on...
Both rare and common genetic variants contribute to autism in the Faroe Islands
NPJ Genomic Medecine Claire S Leblond, Freddy Cliquet, Coralie Carton, Guillaume Huguet, Alexandre Mathieu, Thomas Kergrohen, Julien...
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