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MacSyFinder v2: Improved modelling and search engine to identify molecular systems in genomes
Peer Community Journal Néron B, Denise R, Coluzzi C, Touchon M, Rocha EP, Abby SS. Complex cellular functions are usually encoded by a...
Mar 24, 2023
Yersiniomics, a Multi-Omics Interactive Database for Yersinia Species.
Microbiol Spectr. Lê-Bury P, Druart K, Savin C, Lechat P, Mas Fiol G, Matondo M, Bécavin C, Dussurget O, Pizarro-Cerdá J. The genus...
Feb 27, 2023
Origin of transfer establish networks of functional dependencies for plasmid transfer by conjugation
Nucleic Acids Res Ares-Arroyo M, Coluzzi C, P C Rocha E Plasmids can be transferred between cells by conjugation, thereby driving...
Nov 22, 2022
Enhancing bioreactor arrays for automated measurements and reactive control with ReacSight
Nat Commun Bertaux F, Sosa-Carrillo S, Gross V, Fraisse A, Aditya C, Furstenheim M, Batt G Small-scale, low-cost bioreactors provide...
Jun 22, 2022
Genomic surveillance of enterovirus associated with aseptic meningitis cases in southern Spain, 2015
Scientific Reports Gámbaro F, Pérez AB, Agüera E, Prot M, MartÃnez-MartÃnez L, Cabrerizo M, Simon-Loriere E, Fernandez-Garcia MD New...
May 19, 2022
The impact of antimicrobial use and external introductions on commensal E. coli colistin resistance
Full title: Modelling the impact of antimicrobial use and external introductions on commensal E. coli colistin resistance in small-scale...
May 5, 2022
Nutrient conditions are primary drivers of bacterial capsule maintenance in Klebsiella
Proc. R. Soc. B Buffet A, Rocha EPC, Rendueles O The fitness cost associated with the production of bacterial capsules is considered to...
Mar 3, 2021
The epidemiology of hepatitis delta virus infection in Cameroon
Gut Camille Besombes, Richard Njouom, Juliette Paireau, Guillaume Lachenal, Gaëtan Texier, Mathurin Tejiokem, Simon Cauchemez, Jacques...
Jan 7, 2020
Unlinked rRNA genes are widespread among bacteria and archaea
The ISME Journal Tess E. Brewer, Mads Albertsen, Arwyn Edwards, Rasmus H. Kirkegaard, Eduardo P. C. Rocha & Noah Fierer Ribosomes are...
Nov 11, 2019
Highly pathogenic avian influenza H5N8 in south-west France 2016–2017
Epidemics Alessio Andronic, Aurélie Courcoul, Anne Bronner, Axelle Scoizec, Sophie Lebouquin-Leneveu, Claire Guinat, Mathilde C.Paul,...
Sep 12, 2019
Diversification of the type IV filament superfamily into machines for adhesion, protein secretion
Plos Biology Rémi Denise, Sophie S. Abby, Eduardo P. C. Rocha Processes of molecular innovation require tinkering and shifting in the...
Jul 19, 2019
A Fast Likelihood Method to Reconstruct and Visualize Ancestral Scenarios
Mol Biol Evol. Ishikawa SA, Zhukova A, Iwasaki W, Gascuel O. The reconstruction of ancestral scenarios is widely used to study the...
May 24, 2019
Real-time analysis of the behaviour of groups of mice via a depth-sensing camera
Nature Biomedical Engineering Fabrice de Chaumont, Elodie Ey, Nicolas Torquet, Thibault Lagache, Stéphane Dallongeville, Albane Imbert,...
May 20, 2019
Comparative Analysis of eleven Healthcare-Associated outbreaks of Middle east Respiratory syndrome
Scientific Reports Sibylle Bernard-stoecklin, Birgit Nikolay, Abdullah Assiri, Abdul Aziz Bin saeed, peter Karim Ben embarek, Hassan el...
May 14, 2019
Complete Genome Sequences of Bordetella pertussis Clinical Isolate FR5810
Microbiol Resour Announc Valérie Bouchez, Sarah Louise Baines, Sophie Guillot and Sylvain Brisse Microbiol Resour Announc. 2018 Nov;...
Nov 7, 2018
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