ShareLoc — an open platform for sharing localization microscopy data
Nat Methods Ouyang, W., Bai, J., Singh, M.K. et al. Single-molecule localization microscopy (SMLM) has matured into one of the most...
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Aug 30, 2022
Domain Adapted Multi-task Learning For Segmenting Amoeboid Cells in Microscopy
IEEE Trans Med Imaging Mukherjee S, Sarkar R, Manich M, Labruyere E, Olivo-Marin JC The method proposed in this paper is a robust...
Apr 21, 2022
3D cell morphology detection by association for embryo heart morphogenesis
Biological Imaging Sarkar, R., Darby, D., Meilhac, S., & Olivo-Marin, J Advances in tissue engineering for cardiac regenerative medicine...
Jun 2, 2021
Single-molecule localization microscopy
Published in Nat Rev Methods Primers Lelek M, Gyparaki MT, Beliu G, Schueder F, Griffié J, Manley S, Jungmann R, Sauer M, Lakadamyali M,...
May 10, 2021
Super-resolution visualization and modeling of human chromosomal regions
Genome Biol Hao X, Parmar JJ, Lelandais B, Aristov A, Ouyang W, Weber C, Zimmer C Background The 3D organization of the chromatin fiber...
Nov 23, 2020
Identifying neural substrates of competitive interactions and sequence transitions
Plos Genetics Jean-Baptiste Masson, Francois Laurent, Albert Cardona, Chloe Barre, Nicolas Skatchkovsky, Marta Zlatic, Tihana Jovanic...
Jul 23, 2020
DIVA: Natural Navigation Inside 3D Images Using Virtual Reality
J Mol Biol El Beheiry M, Godard C, Caporal C, Marcon V, Ostertag C, Sliti O, Doutreligne S, Fournier S, Hajj B, Dahan M, JB Masson. As...
Nov 28, 2019
ImJoy: an open-source computational platform for the deep learning era
Nature Methods Wei Ouyang, Florian Mueller, Martin Hjelmare, Emma Lundberg & Christophe Zimmer Deep learning methods have shown...
Apr 15, 2018
Deep learning massively accelerates super-resolution localization microscopy
Nature Biotechnology Ouyang W, Aristov A, Lelek M, Hao X, Zimmer C Nat Biotechnol. 2018 Jun;36(5):460-468. doi: 10.1038/nbt.4106. Epub...
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